pacman::p_load(ggtern, plotly, tidyverse)In-Class Excerise 5
1. Installing and Launching R Packages
Importing Data
pop_data <- read_csv("data/respopagsex2000to2018_tidy.csv") 2. Ternary Plot: ggtern
Data Preparation
Creating three new measures: young, active and old
agpop_mutated <- pop_data %>%
mutate(`Year` = as.character(Year))%>%
spread(AG, Population) %>%
mutate(YOUNG = rowSums(.[4:8]))%>%
mutate(ACTIVE = rowSums(.[9:16])) %>%
mutate(OLD = rowSums(.[17:21])) %>%
mutate(TOTAL = rowSums(.[22:24])) %>%
filter(Year == 2018)%>%
filter(TOTAL > 0)Plotting Ternary Diagram
Creating a plot with colored axis and arrows for ease of understanding.
ggtern(data=agpop_mutated, aes(x=YOUNG,y=ACTIVE, z=OLD)) +
geom_point() +
labs(title="Population structure, 2015") +
theme_rgbw()
Interactive plot: Note that this cannot be converted this using ggplotly
label <- function(txt) {
list(
text = txt,
x = 0.1, y = 1,
ax = 0, ay = 0,
xref = "paper", yref = "paper",
align = "center",
font = list(family = "serif", size = 15, color = "white"),
bgcolor = "#b3b3b3", bordercolor = "black", borderwidth = 2
)
}
axis <- function(txt) {
list(
title = txt, tickformat = ".0%", tickfont = list(size = 10)
)
}
ternaryAxes <- list(
aaxis = axis("Young"),
baxis = axis("Active"),
caxis = axis("Old")
)
plot_ly(
agpop_mutated,
a = ~YOUNG,
b = ~ACTIVE,
c = ~OLD,
color = I("black"),
type = "scatterternary"
) %>%
layout(
annotations = label("Ternary Markers"),
ternary = ternaryAxes
)